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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JC.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.625SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.332SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.6.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.141SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.591SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.468SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.131 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.586SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.366SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.380SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.148SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.382SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.356SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.376SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.607SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.163SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.337SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.158SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.602SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.289SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDHSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.507SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.178SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.273SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.211SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.474SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.297SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AH.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.280SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.597SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.66 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.72 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used