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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.75SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.106SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.593SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.513SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.338SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.498SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.184SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.187SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.342SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.500SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.511SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.506SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.482SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.335SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.499.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.116SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.134SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.393SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.526SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.279SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used