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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KP.4.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.48.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.50.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.81SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.28.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.24.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HL.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used