Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KP.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.20.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.110SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.105SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.103SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HC.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.94SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCDSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.44.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used