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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.7.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.16.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XEBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.263SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.180SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.464SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.234SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.231SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.291SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.349SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.314SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.132SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DR.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ED.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used