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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FL.4.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.568SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.13 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.372SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.634SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.630SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.360SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.578SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.544SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.448SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.425SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.503SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.277SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.294SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.81SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.409SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.587SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.232SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.333SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.621.1 (Mu)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used