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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.520SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.521SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.383SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.157SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.187SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CR.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BT.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.6.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.4.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.71SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used