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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.201SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
W.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.10.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.64SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.68SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.65 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.466SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.339SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.229SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.370SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.421SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.612SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.305SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.32.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HC.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.512SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.349SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.265SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.401SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.362SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BS.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.453SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.637.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.79SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used