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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.109 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.8 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.1 (Kappa)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.16 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.34.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.64SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.8 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.560SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.610SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.10 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.286SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.369SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.69SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.87SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.39.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.73 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.60 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.124.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used