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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.26.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BL.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BS.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.123.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.9.2.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used