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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.39.1.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Q.6 (Alpha)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BC.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BL.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
GA.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.162SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.41SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.182SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.218SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.378SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.97SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.256SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.262SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
XANSWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.372SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
C.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
FW.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
FY.1.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
JN.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
C.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.4.11 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.258.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.4.9 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.258.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.560SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.10 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.87SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.60 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BN.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BQ.1.1.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.5.2.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.121.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.43.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.528SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.91 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
A.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.120.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used