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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.423SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.40SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.160.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.4.2.4 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.75SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.527SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.500SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.68SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.88SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.365SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.71 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.429.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.391SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.515SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.258.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.370SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.2.75.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.494SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.167SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.267SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.165SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.444SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.400.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.492SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.459SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.160.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.124SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.384SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.2.3.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.327SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
W.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.74SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.115SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AZ.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.260SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.456SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.149SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.197SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.491SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
M.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
D.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.318SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.29 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.25.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.5.5 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used