Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
LB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JS.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HG.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.70SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.22.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCFSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.109SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used