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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JQ.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.25.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.16.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.57.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.44.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDCSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.26.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCPSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.6.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.63.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used