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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XDSSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LY.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JE.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.83SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.33.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.4.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used