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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.7.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBVSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.621.1 (Mu)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.16.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XEBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.263SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.180SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.464SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.234SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.231SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.291SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.349SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.314SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.132SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.86 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.7 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.12 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.7.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.390SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.319SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.572SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.397SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Q.3 (Alpha)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.523SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.116 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.38 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.340SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.437SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.452SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used