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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.51 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.122.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.40.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.10.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.323SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.74SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.512SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.349SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.265SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.401SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.362SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BS.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.453SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.637.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.79SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XASSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BL.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.93 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used