Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
C.36.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.316SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.436SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.558SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.518SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.368SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.306SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.533SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KC.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KL.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HC.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.507SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.196SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.237SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.382SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.395SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.153SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.391SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.448SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Q.1 (Alpha)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.99 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used