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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.42.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.348SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.98SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.566SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.579SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.11 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.435SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.445SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.124SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.569SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.524SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.596.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.473SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.332SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used