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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XATSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.74SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.407SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.423SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.281SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.230SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.535SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.564.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.345SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.334SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.589SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.335SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.169SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used