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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.2.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.19.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.214SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.351.3 (Beta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.318SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
R.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.29 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ML.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.283SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.96SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.290SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.341SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.161SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.69 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.139SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.508SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.94SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.463SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.357SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.318SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.557SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.119SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.160SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.447SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.180SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.155SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.92SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.145SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.120SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.504SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.201SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.221SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.410SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.411SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used