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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.428SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.374SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.63 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.377SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.298SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.30.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.76SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.385SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.338SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.20.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XVSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.134SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BY.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.562SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.219SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AZ.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.114SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.199SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.112SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used