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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.415.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.243.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.566SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.480SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.579SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.11 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.435SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.445SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAQSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.569SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.524SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.596.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.595.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.76.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.38.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.38.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.554SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.243.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.2.5.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.450SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.130SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.268SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.344SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.103SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.485SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.119SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.276SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.111SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.336SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.537SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.548SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.24.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.540SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.487SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.118SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.501SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.226SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.546SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.194SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.9 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.25.1.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.203SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.157SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used