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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.1.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.3.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XATSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.85SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BG.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.61SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.74SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.62SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAZSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.43.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.332SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JB.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.86.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JW.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.6.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.141SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.591SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.468SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used