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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.407SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.423SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.281SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.230SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.535SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.564.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.345SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.53SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.450SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.334SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.589SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.335SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.169SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.43SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.42SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.442SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.75SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.106SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
D.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.593SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.438.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.38.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BT.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.76SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.6.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.41SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BS.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used