Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBC.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CP.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FM.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FK.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.7.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.8.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.1.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.123.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.9.2.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EW.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBPSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.256SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.248SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.43SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.559SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.406SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.69SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
ER.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.640SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used