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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.26.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DS.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.11.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BZ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.4.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.5.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.37NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.57NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CN.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.54NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.52NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BL.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.11.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.48NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JQ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.23NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BL.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CK.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used