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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.1.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.51.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDD.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.526 (Iota)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.621 (Mu)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.9.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.34 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.47 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.1.17 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.126 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.48 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.116.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.52 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.13 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.35 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.122 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.7 (Alpha)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.1 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.120.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.93NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GM.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.2.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FU.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used