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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.9.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.76NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.43NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.107NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LF.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.172NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.110NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.320NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.91NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.55.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LQ.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.62NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
MD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.55NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDKNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.54NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.120 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDK.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.119.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.121 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.119 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.46.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.114 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.54 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.64 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.46.4 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.107 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.81 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.117 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.118 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.27 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.617.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.67 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used