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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.134NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BY.1.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CW.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.42NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.46NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBC.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.17.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.23NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.562NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.219NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
N.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XANWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AZ.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.114NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.199NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.190NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.552NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
M.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.333NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.429NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.463NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
U.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.373NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.80NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.433NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.36.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AN.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.221.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.242NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.449NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.152NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
D.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.81NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.71NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.445NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used