Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FR.1.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.2.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.25NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.33NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.29NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.13NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GP.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HL.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XCDNCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.44.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.37NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.45.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FP.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.102NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FK.1.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GN.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.31NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.13.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.7NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BN.1.3.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XCF.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XCCNCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FK.1.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.21.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FP.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.92NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.42NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.35.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.15.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GJ.5.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.21NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FW.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JS.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GK.2.1.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HG.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GE.1.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XCQNCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GS.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.11NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JC.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GK.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.41.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.70NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GJ.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JG.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JM.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.22.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GS.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HK.24NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used