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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.4.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.205EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.110EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.434EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.168EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.39EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.57EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AH.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.289EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.365EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.252EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.223EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.640.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.11 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.428EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.355EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.34.1.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.71 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.33.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.52EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.465EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.160.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.4.2.5 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
S.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.221.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.215EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.82EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.462EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.218EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.74EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.35EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.422EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.56EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.198EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.366EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.441EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.416EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.63EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.263EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used