Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.161EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.69 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.46EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.139EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.508EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.94EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.463EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.357EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.318EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.557EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.119EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.160EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
D.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.447EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.110.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.180EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.155EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.92EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.120EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.77EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.504EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.201EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.221EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.410EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.411EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.310EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.185EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.9EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.329EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.229EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.342EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.90EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.169EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.53EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.528EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.175EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.483EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.113EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.594EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.328EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.547EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.247EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used