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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.510EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.91EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.227EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.555EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.513EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.31EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XAY.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.17EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.479EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.437EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.371EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.625EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.43.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.332EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.6.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.141EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.591EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.468EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.131 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.586EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.366EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.380EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.148EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.382EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.356EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.376EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.607EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.163EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.337EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.158EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.602EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.289EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.595.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.495EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.294EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.453EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.44EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.350EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.304EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.315EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.516EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.354EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.162EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.426EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.402EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.424EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.61EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used