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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.529 (Omicron)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.33 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.99.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.502EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.285EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.582EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.580EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.306EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.280EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.329EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.396EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.595.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.311EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.369EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.367EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.595EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.240EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.192EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.441EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.509EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.293EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.225EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.26 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.103 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
K.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
GL.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.568EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.13 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.372EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.634EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.37.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.630EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.360EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.578EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.544EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.448EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.425EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.354EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.503EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.28EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.2 (Zeta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used