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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.18.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.21.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.13 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.372NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.634NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.37.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.630NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.360NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.578NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.544NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.448NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used