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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.24.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.85NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.503NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.623NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.588NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.210NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.567NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.189NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.563NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.258NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.426NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.399NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.337NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.539NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.164NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.392NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.377NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.22.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used