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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.101NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.88NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used