Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.16 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.46.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.37 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.336NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.317NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.397NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KB.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.42.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.517NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.427 (Epsilon)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.429 (Epsilon)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.166NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.99.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KT.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.359NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.302NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.222NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.434NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.23 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.9 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BU.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used