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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.44.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.45.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.102NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCCNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.21.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.92NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.35.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used