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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.5.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDCNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.26.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.63.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.108NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.104NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used