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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FY.5.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.19.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.58.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.33.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCLNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCTNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used