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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.7.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.123.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.9.2.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EW.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.256NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used