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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBC.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.64NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.82NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.79.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BY.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XJNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.626NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.524NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.15.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.59 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBRNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DJ.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.193NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used