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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.164NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.275NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.419NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.151NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDJNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.36.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDFNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.575.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.620NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDMNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
V.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.149NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.413NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.107NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.10 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used