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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.560NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.10 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.286NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.369NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.69NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.87NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.39.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.73 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.60 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.124.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.80 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.43.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.128 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.257NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.323NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.105 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.9 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.398NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.94 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used