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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5 (Omicron)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.6.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.12.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LZ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KW.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.4.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.90 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.58 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.98 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used