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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.523NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.418NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.389NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.405NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.282NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.228NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.174NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.88 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.106 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.346NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.93NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.576NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.325NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.378NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.206NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.512NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.349NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.401NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.362NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used