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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DT.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.77 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HC.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.93 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.312NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.220NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.142NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used