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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.84NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.269NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.234NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Z.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
V.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.282NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.131NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.274NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.235NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.165NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used